sequences=13 maxmove=0.1 pval=0.1 usescval=false complexatt=true cooling=1.0 currcool=1.0 attfactor=10.0 attvalpow=1 repfactor=10.0 repvalpow=1 dampening=1.0 minattract=1.0 cluster2d=false blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500 formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb showinfo=true zoom=1.0 dotsize=0 ovalsize=10 groupsize=4 usefoldchange=false avgfoldchange=false colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9; colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23): 1.0;0.0;0.0; 0.0;1.0;0.0; 0.0;0.0;1.0; >3KNH-A477-A478 X >3OH5-A1009-A1010 X >3CCJ-01064-01065 X >3OH7-A1009-A1010 X >3OHK-A1009-A1010 X >3OHJ-A1009-A1010 X >3CCS-01064-01065 X >3G71-01064-01065 X >3CD6-01064-01065 X >3CCL-01064-01065 X >3CCR-01064-01065 X >2OTL-01064-01065 X >1VQ6-01064-01065 X 0 1:0.987541400553 0 2:0.849380422833 0 3:1.0 0 4:0.983058003377 0 5:0.942678825651 0 6:0.834818973854 0 7:0.917422164671 0 8:0.929636311451 0 9:0.970100862028 0 10:0.772680545556 0 11:0.951050708115 0 12:0.869421262699 1 2:0.249598161145 1 3:0.0599649908413 1 4:0.176838290575 1 5:0.194424933035 1 6:0.465876338631 1 7:0.528666084073 1 8:0.398567084199 1 9:0.406912503719 1 10:0.692541670016 1 11:0.444456820496 1 12:0.485285035407 2 3:0.259201747975 2 4:0.303721143111 2 5:0.293280496286 2 6:0.485251595728 2 7:0.555250677507 2 8:0.497370065719 2 9:0.504244602229 2 10:0.678564491184 2 11:0.531262743191 2 12:0.539252490454 3 4:0.171538546581 3 5:0.207035434058 3 6:0.476272285814 3 7:0.543487765245 3 8:0.41125448561 3 9:0.418211691761 3 10:0.70771858142 3 11:0.449317660662 3 12:0.496784777521 4 5:0.0842026359313 4 6:0.545367392624 4 7:0.564755433957 4 8:0.437526904792 4 9:0.423100367321 4 10:0.745629734763 4 11:0.451898914162 4 12:0.512111464849 5 6:0.515104949278 5 7:0.518678421603 5 8:0.407166536579 5 9:0.385005920598 5 10:0.702156653519 5 11:0.418950381163 5 12:0.469936392316 6 7:0.265621268519 6 8:0.242869279062 6 9:0.310209865908 6 10:0.263069148249 6 11:0.359234746493 6 12:0.220771971589 7 8:0.267368183237 7 9:0.207005615441 7 10:0.341553759371 7 11:0.280261468699 7 12:0.15701093206 8 9:0.204729453211 8 10:0.417665679635 8 11:0.313716761966 8 12:0.167411075895 9 10:0.44840037964 9 11:0.140979078478 9 12:0.180931895888 10 11:0.467977701797 10 12:0.315874697464 11 12:0.255907738065