sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-21003-21105
X
>3U5F-61015-61117
X
>3OHY-A788-A871
X
>3OHD-A788-A871
X
>3OI0-A788-A871
X
>3R8O-A808-A897
X
>3OHC-A788-A871
X
>2VQF-A788-A871
X
>3OGY-A788-A871
X
>3OGE-A788-A871
X
>2J02-A788-A871
X
>2J00-A788-A871
X
</seq>
<hsp>
0 1:0.445034875637
0 2:0.814398382654
0 3:0.602746510873
0 4:0.802319333554
0 5:0.371620244231
0 6:0.600371672267
0 7:0.439585740703
0 8:0.911938063453
0 9:0.904244542955
0 10:0.50814741582
0 11:0.500158746932
1 2:0.999986370333
1 3:0.798996558419
1 4:0.969398306868
1 5:0.469107831661
1 6:0.783244015863
1 7:0.451926309642
1 8:0.997207354929
1 9:0.973550493778
1 10:0.649382379711
1 11:0.647027248067
2 3:0.309049924367
2 4:0.0852975594467
2 5:0.6495230233
2 6:0.303461493113
2 7:0.808495315014
2 8:0.357909659085
2 9:0.367175912389
2 10:0.714679711368
2 11:0.669700464612
3 4:0.323952823776
3 5:0.478619432338
3 6:0.0602160135384
3 7:0.683538509883
3 8:0.523287069689
3 9:0.502797511333
3 10:0.600369770728
3 11:0.558980353638
4 5:0.638065908055
4 6:0.318508391684
4 7:0.76696550542
4 8:0.343360172307
4 9:0.360454383841
4 10:0.692036365088
4 11:0.648399484869
5 6:0.448442594368
5 7:0.489704785944
5 8:0.643434932894
5 9:0.620475961488
5 10:0.629021308517
5 11:0.596675929785
6 7:0.67935445773
6 8:0.490825604326
6 9:0.465954347341
6 10:0.608186497908
6 11:0.564747874763
7 8:0.805755843117
7 9:0.814345354426
7 10:0.502027893018
7 11:0.501314543457
8 9:0.0964626589239
8 10:0.86957246824
8 11:0.825771545311
9 10:0.86641322968
9 11:0.821630081458
10 11:0.0541664652466
</hsp>