sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A1273-A1274
X
>3OHD-A1273-A1274
X
>2VQE-A1273-A1274
X
>3OGE-A726-A727
X
>3OHD-A726-A727
X
>3OGY-A726-A727
X
>3OHC-A726-A727
X
>2VQF-A1273-A1274
X
>2UUA-A726-A727
X
</seq>
<hsp>
0 1:0.0229359591928
0 2:0.548603245709
0 3:0.762286878858
0 4:0.874962645964
0 5:0.776156146003
0 6:0.858647344719
0 7:0.586785819084
0 8:0.999991086523
1 2:0.551616455493
1 3:0.7480200883
1 4:0.858977576822
1 5:0.762098962242
1 6:0.842824846607
1 7:0.584948609706
1 8:0.991584473043
2 3:0.760580943576
2 4:0.954650421752
2 5:0.760015262159
2 6:0.953502658283
2 7:0.336828168628
2 8:0.777995447249
3 4:0.476738067861
3 5:0.0286233542239
3 6:0.490365536334
3 7:0.839610671007
3 8:0.442880753434
4 5:0.497508492238
4 6:0.0362128186172
4 7:0.884391385615
4 8:0.756028646399
5 6:0.512234831682
5 7:0.846527461055
5 8:0.422589500913
6 7:0.878986511919
6 8:0.77730735238
7 8:0.946647881612
</hsp>