sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1206-A595
X
>2ZJR-X1166-X516
X
>3OH7-A1200-A595
X
>3OH5-A1200-A595
X
>3OHJ-A1200-A595
X
>3OGE-A458-A442
X
>3OGY-A458-A442
X
>2J00-A458-A442
X
>3KNK-A1205-A595
X
>3F1G-A312-A319
X
>3R8N-A1198-A1053
X
>3F1F-A1270-A604
X
>3F1H-A1270-A604
X
>3U5F-61425-61269
X
>3KNI-A873-A916
X
>1FJG-A1176-A1032
X
</seq>
<hsp>
0 1:0.363226335834
0 2:0.20938974193
0 3:0.213717178958
0 4:0.313573981768
0 5:0.348217689226
0 6:0.359103379983
0 7:0.354233660485
0 8:0.279802903582
0 9:0.347556594766
0 10:0.822116411085
0 11:0.24426105802
0 12:0.246860820875
0 13:0.797895269045
0 14:0.705306719382
0 15:0.586842541452
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1 3:0.292560969216
1 4:0.294123947291
1 5:0.510241326947
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1 8:0.385748985187
1 9:0.428809849643
1 10:0.999998041918
1 11:0.376792157903
1 12:0.375258183036
1 13:0.942892657916
1 14:0.825971776618
1 15:0.709274061996
2 3:0.0288495241544
2 4:0.141563294539
2 5:0.469377015
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3 12:0.209085842559
3 13:0.835975151865
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8 9:0.305287684729
8 10:0.820658539192
8 11:0.218711758837
8 12:0.218777926773
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8 14:0.638397534904
8 15:0.550441311164
9 10:0.683373921337
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10 11:0.66826148863
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10 15:0.404456122012
11 12:0.0222316763887
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11 14:0.546192566243
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12 13:0.649818282059
12 14:0.54809376888
12 15:0.414914975428
13 14:0.291196527005
13 15:0.279654166331
14 15:0.321914364135
</hsp>