sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A1269-A1280
X
>3OHK-A1269-A1280
X
>3R8N-A1064-A1189
X
>3OH5-A1269-A1280
X
>3OHY-A158-A141
X
>3OI1-A1269-A1280
X
>3R8O-A1064-A1189
X
>3F1H-A2485-A2434
X
>1FJG-A1043-A1167
X
>2UXC-A1043-A1167
X
>1N32-A1043-A1167
X
>2UUA-A1043-A1167
X
</seq>
<hsp>
0 1:0.0473553498685
0 2:0.343330276323
0 3:0.118504140695
0 4:0.832378583337
0 5:0.144128818053
0 6:0.397737746376
0 7:0.595984267941
0 8:0.359974532093
0 9:0.497119678041
0 10:0.532289676367
0 11:0.441324287289
1 2:0.362865015797
1 3:0.112398965976
1 4:0.833247364914
1 5:0.133019795729
1 6:0.413210145873
1 7:0.597840591403
1 8:0.366264431241
1 9:0.49996039283
1 10:0.537431308257
1 11:0.446777978007
2 3:0.338240513442
2 4:0.986757762551
2 5:0.338713196002
2 6:0.142317674657
2 7:0.738670458104
2 8:0.272406198872
2 9:0.364979038183
2 10:0.442254386941
2 11:0.316463133299
3 4:0.836759019224
3 5:0.098553910896
3 6:0.37300572611
3 7:0.589502692649
3 8:0.309489390045
3 9:0.415301464217
3 10:0.504329680728
3 11:0.381206047775
4 5:0.864499221172
4 6:1.0
4 7:0.329198267087
4 8:0.916171191497
4 9:0.992669401097
4 10:0.910646008372
4 11:0.879430873235
5 6:0.354041402766
5 7:0.616623232746
5 8:0.319389788458
5 9:0.418980377328
5 10:0.512354339803
5 11:0.37052673031
6 7:0.736852555682
6 8:0.211610222726
6 9:0.281462315972
6 10:0.375815884271
6 11:0.221197353716
7 8:0.636170540268
7 9:0.708911599818
7 10:0.662601695592
7 11:0.604650780376
8 9:0.202561435491
8 10:0.252898771692
8 11:0.173246841165
9 10:0.370472914279
9 11:0.177078429675
10 11:0.304003381766
</hsp>