sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHD-A158-A141
X
>3U5B-2165-2147
X
>3OHC-A158-A141
X
>3B4C-B100-B83
X
>3U5F-6304-6104
X
>2H0Z-B101-B84
X
>2H0X-B101-B84
X
>1FJG-A158-A141
X
>2J02-A158-A141
X
</seq>
<hsp>
0 1:0.673979134483
0 2:0.0312031704114
0 3:0.699631571761
0 4:0.999993311406
0 5:0.525990396575
0 6:0.560467133658
0 7:0.666645493516
0 8:0.63184253209
1 2:0.673543096071
1 3:0.322101967899
1 4:0.534773316126
1 5:0.45823702251
1 6:0.41877795928
1 7:0.462912561779
1 8:0.477848397008
2 3:0.694159566049
2 4:0.999711476389
2 5:0.526569258137
2 6:0.555813241064
2 7:0.66037513658
2 8:0.622167658305
3 4:0.551051638597
3 5:0.366740504994
3 6:0.249201996292
3 7:0.44220510924
3 8:0.48158491135
4 5:0.573955505779
4 6:0.625584610829
4 7:0.481364467834
4 8:0.570936944091
5 6:0.28298138832
5 7:0.336758639938
5 8:0.451875444508
6 7:0.454062275836
6 8:0.396322909839
7 8:0.327852183366
</hsp>