sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1554-A1225
X
>3F1F-A1803-A1820
X
>3F1H-A1803-A1820
X
>3U5D-4105-438
X
>3KNI-A1724-A1741
X
>2QA4-01813-01830
X
>3OHJ-A1725-A1742
X
>3OHK-A1725-A1742
X
>3R8S-A1793-A1810
X
>3OI1-A1725-A1742
X
>3OHZ-A1725-A1742
X
>3R8T-A1793-A1810
X
>3OH5-A1725-A1742
X
>3OH7-A1725-A1742
X
>2J03-A1725-A1742
X
>2J01-A1725-A1742
X
</seq>
<hsp>
0 1:0.744442812283
0 2:0.726720927554
0 3:0.369740185035
0 4:0.897847826594
0 5:0.92080873321
0 6:0.759473953269
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0 13:0.750763077053
0 14:0.716655694831
0 15:0.713300369331
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1 10:0.235663593805
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1 12:0.263749637802
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1 15:0.307666134365
2 3:0.834746982693
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8 11:0.109183370018
8 12:0.246654909907
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10 11:0.261524429866
10 12:0.214401351809
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10 14:0.159812866148
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11 12:0.203943251313
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11 15:0.29137777594
12 13:0.0400106105836
12 14:0.215972104121
12 15:0.209692793031
13 14:0.210588435196
13 15:0.207554627463
14 15:0.0317364211158
</hsp>