sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-52597-52651
X
>3R8S-A2468-A2522
X
>3KNI-A2515-A2410
X
>3CCQ-02351-02405
X
>3F1H-A2459-A2513
X
>3F1F-A2459-A2513
X
>2QA4-01144-01148
X
</seq>
<hsp>
0 1:0.286388794007
0 2:0.504171089732
0 3:0.504353593173
0 4:0.48508263168
0 5:0.47784279187
0 6:0.740891009637
1 2:0.493111114332
1 3:0.642667147327
1 4:0.498146161956
1 5:0.498757059606
1 6:0.747410758889
2 3:0.56664483007
2 4:0.636837590778
2 5:0.641417550084
2 6:0.999999408379
3 4:0.437550559232
3 5:0.427904813641
3 6:0.842828426618
4 5:0.0331443262134
4 6:0.637560911498
5 6:0.645192748242
</hsp>