sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2515-A2410
X
>3R8S-A2207-A1353
X
>3OHJ-A2440-A2335
X
>3OHK-A2440-A2335
X
>3R8T-A2602-A2497
X
>3F1H-A2594-A2489
X
>3F1F-A2594-A2489
X
</seq>
<hsp>
0 1:1.0
0 2:0.475327953444
0 3:0.446237706308
0 4:0.388676659791
0 5:0.488033217733
0 6:0.507367238908
1 2:0.962856414581
1 3:0.962070441418
1 4:0.853700285368
1 5:0.91920270282
1 6:0.92378363706
2 3:0.0431894259645
2 4:0.306506965816
2 5:0.254902007957
2 6:0.260039127564
3 4:0.287239835241
3 5:0.235167991475
3 6:0.243236927159
4 5:0.267725016325
4 6:0.276946233678
5 6:0.0253936545245
</hsp>