sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A1707-A2416
X
>3KNI-A1706-A2491
X
>3OHK-A1707-A2416
X
>3OHZ-A1707-A2416
X
>3OI1-A1707-A2416
X
>3OH5-A1707-A2416
X
>3OH7-A1707-A2416
X
>2ZJR-X1675-X2373
X
>3F1F-A1785-A2570
X
>3F1H-A1785-A2570
X
>2J03-A1707-A2463
X
>2J01-A1707-A2463
X
</seq>
<hsp>
0 1:0.62780260656
0 2:0.100959717251
0 3:0.248302222466
0 4:0.255670641286
0 5:0.178243179657
0 6:0.20108109749
0 7:0.969845198033
0 8:0.293818462206
0 9:0.294664637111
0 10:0.891317726591
0 11:0.876610286344
1 2:0.630736020951
1 3:0.508630674823
1 4:0.517103463647
1 5:0.560257421311
1 6:0.550710239864
1 7:0.914402089943
1 8:0.715127831825
1 9:0.690907240357
1 10:0.726567746516
1 11:0.690815514046
2 3:0.284502915803
2 4:0.271727052194
2 5:0.165674933577
2 6:0.171189646166
2 7:1.0
2 8:0.280957431171
2 9:0.278278636955
2 10:0.898350120293
2 11:0.882186186735
3 4:0.0893584782755
3 5:0.208659501622
3 6:0.23133450211
3 7:0.784784499536
3 8:0.300871679973
3 9:0.288884462421
3 10:0.751472440703
3 11:0.735510956892
4 5:0.183920804713
4 6:0.198872008543
4 7:0.787620554953
4 8:0.290140247184
4 9:0.265649648502
4 10:0.757444957205
4 11:0.740471600393
5 6:0.0769670497873
5 7:0.914365913052
5 8:0.240399898248
5 9:0.214179710167
5 10:0.81096186042
5 11:0.792391807498
6 7:0.918379194169
6 8:0.257291817055
6 9:0.231562595928
6 10:0.798391309798
6 11:0.778660970663
7 8:0.895536704134
7 9:0.878060232634
7 10:0.67577659875
7 11:0.676271319056
8 9:0.0660141828313
8 10:0.790197678715
8 11:0.782179533567
9 10:0.78173595658
9 11:0.771907191582
10 11:0.0568362642721
</hsp>