sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1U0B-A15-A56
X
>3EGZ-B19-B56
X
>3U5D-11413-11452
X
>2OEU-A7-A25
X
>3U5H-51419-51458
X
>1B23-R15-R56
X
</seq>
<hsp>
0 1:0.806356816193
0 2:0.84771683666
0 3:0.99999970517
0 4:0.755598306174
0 5:0.720921127099
1 2:0.690987623516
1 3:0.670005489746
1 4:0.694940757773
1 5:0.907749495029
2 3:0.261595880896
2 4:0.238191066545
2 5:0.741780500077
3 4:0.41109636294
3 5:0.905230323393
4 5:0.591538916224
</hsp>