sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J02-A906-A910
X
>2J00-A906-A910
X
>2UUB-A906-A910
X
>3U5F-6780-6768
X
>3R8N-A932-A936
X
>2VQF-A906-A910
X
>2UUA-A906-A910
X
>2UXC-A906-A910
X
>1N32-A906-A910
X
>1XMQ-A906-A910
X
>3F1E-A906-A910
X
>3F1G-A906-A910
X
>1FJG-A906-A910
X
</seq>
<hsp>
0 1:0.0213015001629
0 2:0.561928415492
0 3:0.917230531372
0 4:0.455883043399
0 5:0.544598855822
0 6:0.555244006113
0 7:0.601648454134
0 8:0.649262094565
0 9:0.623370356377
0 10:0.553197317014
0 11:0.554528922692
0 12:0.560603985406
1 2:0.546997974083
1 3:0.912905331585
1 4:0.446977894209
1 5:0.529695228126
1 6:0.540642696437
1 7:0.5869198607
1 8:0.635054182378
1 9:0.610265153447
1 10:0.543817530983
1 11:0.545639798633
1 12:0.549245188253
2 3:0.950262993985
2 4:0.383367874022
2 5:0.162340345467
2 6:0.206669657339
2 7:0.120614611582
2 8:0.182214491884
2 9:0.279739332556
2 10:0.379968910057
2 11:0.392147460132
2 12:0.297837542024
3 4:1.0
3 5:0.908789846391
3 6:0.942113392395
3 7:0.956755960866
3 8:0.970916991247
3 9:0.865739530964
3 10:0.7112620826
3 11:0.714881818823
3 12:0.846940254542
4 5:0.358230576682
4 6:0.343108188592
4 7:0.370745659787
4 8:0.492419664317
4 9:0.403721823796
4 10:0.543353164706
4 11:0.551758795899
4 12:0.375813481814
5 6:0.0848813265473
5 7:0.123039531517
5 8:0.203519209681
5 9:0.158316444402
5 10:0.433925559369
5 11:0.446687864282
5 12:0.181116598839
6 7:0.146496686567
6 8:0.242572442296
6 9:0.153900026515
6 10:0.490197441922
6 11:0.503030425537
6 12:0.193809745118
7 8:0.144325940449
7 9:0.190273746612
7 10:0.418699169358
7 11:0.430996543655
7 12:0.222906302803
8 9:0.251114887697
8 10:0.40826662494
8 11:0.417883412974
8 12:0.269041040796
9 10:0.46017976384
9 11:0.472895538191
9 12:0.112527416011
10 11:0.0198508543288
10 12:0.423896122559
11 12:0.433931565853
</hsp>