sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-0917-0999
X
>1VQ6-0917-0999
X
>2QA4-0916-0998
X
>1YJN-0917-0999
X
>1YIT-0917-0999
X
>2OTJ-0917-0999
X
>3CCS-0917-0999
X
>1YJ9-0917-0999
X
>1N8R-A917-A999
X
>1Q86-A917-A999
X
>1K8A-A917-A999
X
</seq>
<hsp>
0 1:0.523907625967
0 2:0.756495259485
0 3:0.753952936661
0 4:0.618884730915
0 5:0.706765456586
0 6:0.755468246278
0 7:0.816789245037
0 8:0.687028285441
0 9:0.887786688035
0 10:0.965270206095
1 2:0.853310167308
1 3:0.575945580666
1 4:0.291337564618
1 5:0.328088569422
1 6:0.402784753782
1 7:0.389239900129
1 8:0.401835434066
1 9:0.500894681752
1 10:0.64839824772
2 3:0.936937948566
2 4:0.787285462465
2 5:0.8578888699
2 6:0.80201239396
2 7:0.999997266121
2 8:0.807283239082
2 9:0.887286285854
2 10:0.859987024742
3 4:0.438121424227
3 5:0.468106503666
3 6:0.503490420254
3 7:0.468700514022
3 8:0.51087240868
3 9:0.556360689558
3 10:0.651904282897
4 5:0.304623585828
4 6:0.399339802495
4 7:0.309953353153
4 8:0.33548426393
4 9:0.469870217441
4 10:0.579457687188
5 6:0.256336220137
5 7:0.199673879987
5 8:0.282808547781
5 9:0.252639856399
5 10:0.460915048892
6 7:0.346193553614
6 8:0.268310537092
6 9:0.196252938114
6 10:0.28188688532
7 8:0.32516213963
7 9:0.322441051519
7 10:0.498973746542
8 9:0.358362311211
8 10:0.364318152869
9 10:0.292133640489
</hsp>