sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2PXU-B17-B33
X
>3NDB-M79-M95
X
>2PXD-B17-B33
X
>2PXQ-B17-B33
X
>2PXF-B17-B33
X
>2PXK-B17-B33
X
>2PXE-B17-B33
X
>1LNG-B62-B78
X
>3LQX-B17-B33
X
>2PXB-B17-B33
X
>2PXV-B17-B33
X
>2V3C-M60-M76
X
>2PXL-B17-B33
X
>2PXT-B17-B33
X
>1HQ1-B17-B33
X
>2PXP-B17-B33
X
>1DUL-B17-B33
X
</seq>
<hsp>
0 1:0.670862405216
0 2:0.339878158562
0 3:0.918244928366
0 4:0.980027827579
0 5:0.519686932459
0 6:0.822069857696
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0 12:0.533761126711
0 13:0.578040250048
0 14:0.65668134508
0 15:0.601378115244
0 16:0.602112413017
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1 12:0.567451336039
1 13:0.660178118455
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1 15:0.593944034057
1 16:0.549601727723
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3 4:0.74666326844
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3 7:0.881257044847
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3 11:1.0
3 12:0.683952514406
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7 12:0.361000800597
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7 14:0.494865462792
7 15:0.380550641003
7 16:0.437469608772
8 9:0.296634444406
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9 10:0.399741716334
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9 12:0.214765804904
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10 11:0.809959003711
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10 15:0.321622789604
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11 12:0.487219106389
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12 13:0.224655255101
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13 15:0.20044715922
13 16:0.169638727677
14 15:0.231866020067
14 16:0.115602679409
15 16:0.174508343711
</hsp>