sequences=21
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-A1873-A1872
X
>1ASZ-R35-R34
X
>1YHQ-02670-02669
X
>2QA4-0548-0547
X
>3CCQ-02670-02669
X
>1VQ6-02712-02711
X
>1K9M-A2670-A2669
X
>3CCE-0638-0637
X
>3CD6-02670-02669
X
>3CC7-02712-02711
X
>3F1H-A2667-A2666
X
>2PXQ-B22-B21
X
>1YJW-0840-0839
X
>2J02-A1468-A1467
X
>1Q82-A2712-A2711
X
>3G71-0167-0166
X
>1M5K-E81-E80
X
>2OTL-02356-02355
X
>2UUA-X2-X1
X
>1Q81-A1838-A1837
X
>1YI2-02356-02355
X
</seq>
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