sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6226-6225
X
>1YHQ-01776-01775
X
>2J00-A1126-A1125
X
>3R8N-A1405-A1404
X
>2UUB-A1126-A1125
X
>1Q86-A1776-A1775
X
>1N8R-A159-A158
X
>1FJG-A1126-A1125
X
>3GCA-A6-A5
X
>1VQ7-02432-02431
X
>1QVG-0159-0158
X
>3CD6-0159-0158
X
>3CCL-02432-02431
X
>3CCU-0159-0158
X
>1K8A-A159-A158
X
</seq>
<hsp>
0 1:0.613881239555
0 2:0.416917085908
0 3:0.495463650209
0 4:0.477935917493
0 5:0.551321448364
0 6:0.914962539665
0 7:0.559617767172
0 8:0.55280496534
0 9:0.773970140794
0 10:1.0
0 11:0.928555598151
0 12:0.959424431235
0 13:0.942056815176
0 14:0.96296181147
1 2:0.314756972452
1 3:0.234824869368
1 4:0.377964671608
1 5:0.14135999241
1 6:0.528047664988
1 7:0.253431858461
1 8:0.396159687866
1 9:0.331803271326
1 10:0.629405083986
1 11:0.557558626527
1 12:0.505008962533
1 13:0.548087031729
1 14:0.499238670037
2 3:0.21494453424
2 4:0.293653824896
2 5:0.270836711442
2 6:0.670274431487
2 7:0.272629376013
2 8:0.299991794105
2 9:0.488339357393
2 10:0.750490885208
2 11:0.692155019862
2 12:0.677569858231
2 13:0.699710462602
2 14:0.669702915739
3 4:0.220947101053
3 5:0.159061674923
3 6:0.546734204412
3 7:0.230882377861
3 8:0.33060481703
3 9:0.39642107637
3 10:0.646402004209
3 11:0.600050960714
3 12:0.598914647498
3 13:0.577763739695
3 14:0.568192227766
4 5:0.291461761539
4 6:0.531827934898
4 7:0.219675246629
4 8:0.347486521139
4 9:0.449116904434
4 10:0.617326679689
4 11:0.617721354125
4 12:0.6522180897
4 13:0.57739481866
4 14:0.59635121331
5 6:0.467949335492
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5 10:0.568300862614
5 11:0.492998711143
5 12:0.480445010724
5 13:0.485580007387
5 14:0.465434987458
6 7:0.476266124394
6 8:0.488424244483
6 9:0.329197677135
6 10:0.164229426194
6 11:0.217670569984
6 12:0.287122395322
6 13:0.170718417471
6 14:0.203394929837
7 8:0.279841359413
7 9:0.337279504892
7 10:0.554599323794
7 11:0.532211807595
7 12:0.515843407894
7 13:0.515126702294
7 14:0.49373693571
8 9:0.366078634683
8 10:0.537174912567
8 11:0.466167896382
8 12:0.48045570771
8 13:0.515474907463
8 14:0.496244049295
9 10:0.366369286781
9 11:0.293504999687
9 12:0.281362290809
9 13:0.26837409647
9 14:0.246667330335
10 11:0.204615813929
10 12:0.297411236323
10 13:0.156511625453
10 14:0.201935728411
11 12:0.173667718791
11 13:0.163735921398
11 14:0.195082281526
12 13:0.260386097926
12 14:0.182332733594
13 14:0.171128179964
</hsp>