sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A970-A969
X
>3CCJ-01264-01263
X
>1YIT-0275-0274
X
>3R8T-A2298-A2297
X
>3CME-01145-01144
X
>3R8S-B48-B47
X
>3CUN-D76-D75
X
>1VQO-01264-01263
X
>3OHZ-A184-A183
X
</seq>
<hsp>
0 1:0.303410362413
0 2:0.642163024514
0 3:0.999974077648
0 4:0.662001103452
0 5:0.194714721051
0 6:0.591150071789
0 7:0.470520827777
0 8:0.741361486704
1 2:0.496155449272
1 3:0.780436788812
1 4:0.444378867911
1 5:0.371820557148
1 6:0.417756047678
1 7:0.248671235595
1 8:0.579440930531
2 3:0.47006817659
2 4:0.350175855217
2 5:0.594577106186
2 6:0.200060269599
2 7:0.297602589184
2 8:0.278147000332
3 4:0.488761227599
3 5:0.9552594073
3 6:0.540990059645
3 7:0.546571031889
3 8:0.488901089963
4 5:0.63956588699
4 6:0.214707269627
4 7:0.290938553608
4 8:0.389981288156
5 6:0.550849464877
5 7:0.465412432589
5 8:0.651267406502
6 7:0.268590621884
6 8:0.281311886752
7 8:0.408445105943
</hsp>