sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YIT-01141-01140
X
>2J01-A1802-A1801
X
>1VQN-980-979
X
>3U5D-11642-11641
X
>3D2G-B21-B20
X
>3G71-980-979
X
>1XMQ-A462-A461
X
>2J00-A431-A430
X
>1Q82-A2351-A2350
X
>1KD1-A2351-A2350
X
>3PDR-X74-X73
X
>2VPL-D36-D35
X
>2QA4-0916-0915
X
>1VQP-01601-01600
X
</seq>
<hsp>
0 1:0.37076093467
0 2:0.256806478042
0 3:0.78073380211
0 4:0.833218125346
0 5:0.321619481528
0 6:0.317246321292
0 7:0.589197963795
0 8:0.458192562038
0 9:0.439052262208
0 10:0.491596030172
0 11:0.874206888133
0 12:0.641156815704
0 13:0.654805634534
1 2:0.383701846741
1 3:0.597811292717
1 4:0.785835017869
1 5:0.50322529301
1 6:0.368905082775
1 7:0.396277857865
1 8:0.509172309744
1 9:0.488759943747
1 10:0.503991884687
1 11:0.62343959025
1 12:0.558219822818
1 13:0.508417062456
2 3:0.850875810984
2 4:0.753944138628
2 5:0.188119700008
2 6:0.286051114611
2 7:0.613715921198
2 8:0.25997244461
2 9:0.267322517504
2 10:0.431937801647
2 11:0.793080778825
2 12:0.503275998549
2 13:0.558918367735
3 4:0.967566133618
3 5:0.941950812784
3 6:0.839227666393
3 7:0.361186284473
3 8:0.996436359614
3 9:0.979975946964
3 10:0.733303170814
3 11:0.603000892864
3 12:0.713768926824
3 13:0.5720990721
4 5:0.689529292235
4 6:0.756085407432
4 7:0.815901846155
4 8:0.77028324558
4 9:0.787133517824
4 10:1.0
4 11:0.611176569469
4 12:0.875342226612
4 13:0.661775994112
5 6:0.266635372488
5 7:0.721413050041
5 8:0.278673967071
5 9:0.28060756573
5 10:0.529756180487
5 11:0.852583459208
5 12:0.612686723555
5 13:0.630556055098
6 7:0.661211178373
6 8:0.36418921667
6 9:0.327513248629
6 10:0.492125887243
6 11:0.805300671603
6 12:0.642093318126
6 13:0.638296009343
7 8:0.718924795618
7 9:0.706782333432
7 10:0.563195965401
7 11:0.529511327568
7 12:0.500332808381
7 13:0.343208130485
8 9:0.0706848720926
8 10:0.517776440435
8 11:0.839866044419
8 12:0.539720621509
8 13:0.602557173292
9 10:0.496816954393
9 11:0.85016710438
9 12:0.554209459677
9 13:0.609401938863
10 11:0.839245282731
10 12:0.363664801775
10 13:0.524991847502
11 12:0.636520794846
11 13:0.417027823304
12 13:0.307831711358
</hsp>