sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A942-A941
X
>1VQL-0267-0266
X
>2QA4-01211-01210
X
>2OTJ-01215-01214
X
>1VQO-01215-01214
X
>2UXC-A49-A48
X
>1K9M-A223-A222
X
>1VQ6-01696-01695
X
>1K8A-A1696-A1695
X
>2VQE-A49-A48
X
>3SKI-B46-B45
X
</seq>
<hsp>
0 1:0.861387216355
0 2:0.69944993136
0 3:0.611702196483
0 4:0.692032961794
0 5:0.90384998755
0 6:0.855237815697
0 7:0.914104383124
0 8:0.920686044785
0 9:1.0
0 10:0.956651771481
1 2:0.301213417094
1 3:0.337845821083
1 4:0.355761386923
1 5:0.403123748849
1 6:0.213040146955
1 7:0.238779273717
1 8:0.37502698102
1 9:0.460532816365
1 10:0.563966056581
2 3:0.212378196925
2 4:0.223991683056
2 5:0.503566010956
2 6:0.281199158574
2 7:0.423645823229
2 8:0.5684034325
2 9:0.604364649718
2 10:0.707828476001
3 4:0.180034289184
3 5:0.386110643188
3 6:0.290042025071
3 7:0.418081172303
3 8:0.510659602076
3 9:0.509479089736
3 10:0.613973351709
4 5:0.414817548218
4 6:0.296498137012
4 7:0.41338361464
4 8:0.53094880953
4 9:0.526558935421
4 10:0.618536271747
5 6:0.313153635583
5 7:0.321888515264
5 8:0.358358297007
5 9:0.1556364662
5 10:0.393245588834
6 7:0.229517251846
6 8:0.39634167866
6 9:0.380029551861
6 10:0.509622269902
7 8:0.21310983218
7 9:0.310149382
7 10:0.387129211166
8 9:0.305287086556
8 10:0.324629129341
9 10:0.323883901021
</hsp>