sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A1238-A1237
X
>2ZJR-X1697-X1696
X
>1FFK-090-089
X
>3OI0-A1238-A1237
X
>3CXC-02515-02514
X
>3CC7-02515-02514
X
>1VQL-9105-9104
X
>1K8A-A2515-A2514
X
>3CMA-02515-02514
X
>1Q82-A655-A654
X
>3CC2-0655-0654
X
</seq>
<hsp>
0 1:0.970426599645
0 2:0.788563097138
0 3:0.199989296556
0 4:0.708987252932
0 5:0.68042039237
0 6:0.566326397923
0 7:0.783348614631
0 8:0.677740569827
0 9:0.679238239368
0 10:0.716418754402
1 2:0.543457316647
1 3:1.0
1 4:0.74154137908
1 5:0.800132676891
1 6:0.600791669984
1 7:0.664353960162
1 8:0.674675874243
1 9:0.65156597404
1 10:0.580068350277
2 3:0.809637736462
2 4:0.535592016404
2 5:0.537272346529
2 6:0.306199828753
2 7:0.474332366884
2 8:0.498000224868
2 9:0.325714367116
2 10:0.306843348618
3 4:0.736234810767
3 5:0.718289712054
3 6:0.58833024436
3 7:0.806787428669
3 8:0.706979324478
3 9:0.679317977569
3 10:0.710030160874
4 5:0.109949271451
4 6:0.440083250887
4 7:0.155171734416
4 8:0.18348977292
4 9:0.284102825777
4 10:0.349534514804
5 6:0.421864244296
5 7:0.196550773388
5 8:0.191805923605
5 9:0.295217436909
5 10:0.371287643055
6 7:0.401434477231
6 8:0.33798741392
6 9:0.274531527236
6 10:0.26180029725
7 8:0.140890248224
7 9:0.253032404082
7 10:0.278579801193
8 9:0.259791618513
8 10:0.279689980261
9 10:0.113367357268
</hsp>