sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCS-01931-01942
X
>3G9C-R33-R58
X
>3R8T-A1936-A1947
X
>3CCR-01931-01942
X
>3G9C-Q33-Q58
X
>3G9C-P33-P58
X
>3G9C-S33-S58
X
>3G8T-S33-S58
X
>3G8T-P33-P58
X
>3L3C-P33-P58
X
>3G8T-Q33-Q58
X
>3G8T-R33-R58
X
>2NZ4-S33-S58
X
>2NZ4-R33-R58
X
>2NZ4-P33-P58
X
</seq>
<hsp>
0 1:0.450933601426
0 2:0.343642721918
0 3:0.143520884988
0 4:0.356708652132
0 5:0.606002507322
0 6:0.588095651134
0 7:0.754000032731
0 8:0.869438252649
0 9:0.893832189182
0 10:0.7350041105
0 11:0.673746100409
0 12:0.999157197903
0 13:0.941936575777
0 14:0.958313866745
1 2:0.518189985459
1 3:0.537888580588
1 4:0.381995880662
1 5:0.521776421126
1 6:0.48734244938
1 7:0.710120475245
1 8:0.822537668914
1 9:0.809656838257
1 10:0.821789206829
1 11:0.725290306517
1 12:0.966890964956
1 13:0.971996361967
1 14:0.999999042711
2 3:0.334572618369
2 4:0.226564778198
2 5:0.557126597893
2 6:0.538600348998
2 7:0.589605642274
2 8:0.63121319532
2 9:0.626653779091
2 10:0.505339248093
2 11:0.440401732361
2 12:0.727564257479
2 13:0.702784797449
2 14:0.708618035612
3 4:0.371048378318
3 5:0.62373887229
3 6:0.575345734654
3 7:0.738598765836
3 8:0.832514075271
3 9:0.867450819294
3 10:0.675720847824
3 11:0.618729505857
3 12:0.968395205248
3 13:0.887492674774
3 14:0.901697087179
4 5:0.410409791621
4 6:0.413201949163
4 7:0.581945067027
4 8:0.607114687456
4 9:0.563846556139
4 10:0.512065849673
4 11:0.412540802399
4 12:0.688293363037
4 13:0.677851608103
4 14:0.694618183565
5 6:0.500817205009
5 7:0.915842164904
5 8:0.776550748556
5 9:0.642409072572
5 10:0.736485524974
5 11:0.617877974933
5 12:0.730581869434
5 13:0.750796410674
5 14:0.753821227406
6 7:0.67980638264
6 8:0.727765869824
6 9:0.60363068948
6 10:0.698923817386
6 11:0.535820659193
6 12:0.815372979867
6 13:0.773075622877
6 14:0.813987329804
7 8:0.457929112205
7 9:0.622329979548
7 10:0.484440589866
7 11:0.481931700261
7 12:0.754906240235
7 13:0.701513321293
7 14:0.748874149729
8 9:0.380498870764
8 10:0.298917028669
8 11:0.328880102746
8 12:0.42140934311
8 13:0.373152213423
8 14:0.391277041882
9 10:0.443632877189
9 11:0.337387733641
9 12:0.263767922495
9 13:0.356086956604
9 14:0.378118043898
10 11:0.180277582605
10 12:0.438966181544
10 13:0.311421881818
10 14:0.330572973198
11 12:0.418158090451
11 13:0.314427808894
11 14:0.349604385358
12 13:0.250087851926
12 14:0.236047587067
13 14:0.0973614051015
</hsp>