ClaRNA

Doublet Group info: classifier/stacking/<>/UA/sub-002

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <>/UA/sub-002
Members:
count: 72
download members
1VQL:0577:0575
3CCM:0577:0575
1VQK:0577:0575
3CCE:0577:0575
3R8O:A889:A887
3U5D:184:182
1VQM:0577:0575
1VQN:0577:0575
1VQP:0577:0575
3OI0:A863:A861
3CCJ:978:976
3OHC:A863:A861
2QEX:0577:0575
3OH7:A187:A185
3OGY:A863:A861
3KNH:A854:A852
3OI1:A1216:A1214
3R8S:A1260:A1258
3OHZ:A1216:A1214
3OH7:A224:A222
2QA4:0202:0200
3CC7:0453:0451
2QEX:0453:0451
1VQ4:978:976
1YJW:0453:0451
3OHZ:A224:A222
3U5H:5945:52390
3CCU:0453:0451
3CCJ:0577:0575
3CCE:0453:0451
1M90:A453:A451
1N8R:A453:A451
3CCE:0164:0162
1Q86:A164:A162
3CCJ:0453:0451
1VQP:0453:0451
1YHQ:0453:0451
1K8A:A453:A451
1VQ4:0453:0451
1YJ9:978:976
1Q81:A202:A200
3I56:0164:0162
1VQO:0453:0451
1VQ9:0453:0451
1VQ8:0164:0162
1VQM:0453:0451
3CD6:0453:0451
3CPW:0164:0162
1S72:0164:0162
3OHK:A187:A185
3CME:0164:0162
1Q82:A453:A451
1FFK:0452:0450
1VQL:0453:0451
1VQK:0164:0162
1JJ2:0453:0451
3G6E:0164:0162
3CCL:0164:0162
1NJI:A453:A451
1YHQ:0164:0162
1S72:0453:0451
3CC2:0164:0162
3CC7:0164:0162
1YJ9:0164:0162
3CCV:0164:0162
1VQ6:0164:0162
1VQ7:0164:0162
1VQ5:0164:0162
1YI2:0164:0162
1M90:A164:A162
3CMA:0164:0162
3CCM:0164:0162
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 11 0.055
base-ribose/H_0BR 5 0.083
stacking/<< 2 0.110
base-phosphate/W_3BPh 2 0.166
stacking/>> 74 0.168
base-phosphate/H_7BPh 1 0.179
base-phosphate/H_9BPh 6 0.181
base-ribose/W_5BR 57 0.215
base-ribose/W_6BR 2 0.237
base-phosphate/W_6BPh 5 0.237

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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