ClaRNA

Doublet Group info: classifier/stacking/<>/UA/sub-003

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <>/UA/sub-003
Members:
count: 68
download members
1VQ9:0941:02148
1YJW:0941:02148
1S72:0941:02148
3CMA:0941:02148
1JJ2:0941:02148
3CCE:0941:02148
3G71:0941:02148
3CCQ:0941:02148
3KNI:A224:A222
3CPW:0941:02148
3CC4:0941:02148
3CCU:0941:02148
2OTJ:0941:02148
1YIJ:0941:02148
3CCM:0941:02148
1YI2:0941:02148
1VQM:0941:02148
3G6E:0941:02148
1VQO:0941:02148
1VQK:0941:02148
3D0U:A24:A22
2J03:A2533:A2531
3DIQ:A27:A25
3CCS:0453:0451
3DIY:A27:A25
3CCQ:0453:0451
3F1F:A395:A393
3F1H:A395:A393
1YIJ:0453:0451
3CCL:0453:0451
3CMA:0202:0200
1YIT:0453:0451
3OH5:A388:A386
3OH7:A388:A386
1YJ9:0453:0451
1VQO:0202:0200
3DIO:X27:X25
3CCR:978:976
1VQM:0202:0200
3OHZ:A388:A386
1VQP:0202:0200
2J01:A388:A386
3DJ2:A27:A25
1VQK:0202:0200
1VQ5:0453:0451
3CCL:978:976
3OI1:A388:A386
3DJ0:A27:A25
3CCQ:0202:0200
3U5D:1351:1349
3U5D:147:145
1VQ9:978:976
2QEX:978:976
1YJW:978:976
1VQ8:978:976
1YJW:0202:0200
1YIT:978:976
1M90:B78:B76
1YIJ:978:976
1N8R:B78:B76
3OHJ:A388:A386
3CMA:978:976
1VQ6:978:976
3CC2:978:976
3G6E:978:976
1VQ5:978:976
1VQ7:978:976
1VQP:978:976
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/H_9BR 2 0.051
base-phosphate/H_9BPh 2 0.075
stacking/>> 24 0.108
stacking/<< 34 0.128
base-ribose/H_0BR 3 0.128
stacking/<> 18 0.142
base-phosphate/W_3BPh 3 0.159
base-phosphate/H_8BPh 19 0.180
base-ribose/W_5BR 4 0.201
base-phosphate/H_0BPh 62 0.224

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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