ClaRNA

Doublet Group info: classifier/stacking/<>/UA/sub-006

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <>/UA/sub-006
Members:
count: 27
download members
1FFK:0105:0118
3F1F:A112:A143
3F1H:A112:A143
1VQ9:0105:0119
3CCL:0105:0119
2J01:A112:A143
3CCQ:0105:0119
3CC7:0105:0119
1VQL:0105:0119
1VQ8:0105:0119
3CD6:0105:0119
3OH5:A112:A143
1YIT:0105:0119
1YHQ:0105:0119
1VQP:0105:0119
3CC2:0105:0119
1K9M:A105:A119
3CCS:0105:0119
1VQO:0105:0119
3CCR:0105:0119
3OI1:A112:A143
1KD1:A105:A119
1N8R:A105:A119
1NJI:A105:A119
3I56:0105:0119
3CCE:0105:0119
1VQ6:0105:0119
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 8 0.119
base-ribose/H_0BR 5 0.128
stacking/<< 2 0.143
base-phosphate/H_9BPh 10 0.143
stacking/>> 2 0.178
base-phosphate/W_5BPh 2 0.363
base-phosphate/H_7BPh 2 0.376
base-phosphate/H_8BPh 4 0.539
base-ribose/H_9BR 2 0.633
base-ribose/H_7BR 1 0.732

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol