sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCM-02380-02042
X
>3CCV-02380-02042
X
>1VQ8-02380-02042
X
>1FG0-A371-A33
X
>3CCQ-02380-02042
X
>1YIT-02380-02042
X
>3CCL-02380-02042
X
>1VQP-02380-02042
X
>3CC4-02380-02042
X
>3CCU-02380-02042
X
>3CC7-02380-02042
X
>1YI2-02380-02042
X
>1YIJ-02380-02042
X
>1K9M-A2380-A2042
X
>1M90-A2380-A2042
X
>3CCJ-02380-02042
X
</seq>
<hsp>
0 1:0.594865922226
0 2:0.621094967222
0 3:0.840191513006
0 4:0.787693016671
0 5:0.78699264685
0 6:0.834064900372
0 7:0.807637514624
0 8:0.763460581297
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0 10:0.82055943724
0 11:0.858655164472
0 12:0.863128437811
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0 15:0.999986086544
1 2:0.372225299486
1 3:0.701330840893
1 4:0.389400523447
1 5:0.604777973216
1 6:0.495989183862
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1 9:0.497142004495
1 10:0.50979080192
1 11:0.63837626584
1 12:0.660319116549
1 13:0.712153494713
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1 15:0.773546627126
2 3:0.426553498016
2 4:0.396513548196
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3 4:0.694769964334
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4 5:0.345033397091
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8 9:0.20343311335
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8 11:0.312696315351
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8 15:0.326308926609
9 10:0.140855912119
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10 14:0.256046840132
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11 12:0.132458543328
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12 13:0.208439365935
12 14:0.0835347285826
12 15:0.23565417094
13 14:0.207625643254
13 15:0.303273264863
14 15:0.199033705233
</hsp>