sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A2771-A2773
X
>3U5H-52905-53047
X
>3Q50-A20-A22
X
>2HO6-B68-B70
X
>2H0S-B68-B70
X
>1XMQ-A162-A198
X
>1N32-A162-A198
X
>1FJG-A162-A198
X
>2UUB-A162-A198
X
>2VQE-A162-A198
X
>3F1G-A162-A198
X
>3R8N-A171-A195
X
</seq>
<hsp>
0 1:0.61313643783
0 2:0.598070115509
0 3:0.459104431118
0 4:0.533969805594
0 5:0.519586466636
0 6:0.548386577846
0 7:0.678995075678
0 8:0.592880887254
0 9:0.540231713575
0 10:0.764619187954
0 11:0.808556677
1 2:0.915115882878
1 3:0.897299117542
1 4:1.0
1 5:0.591865410598
1 6:0.548591212244
1 7:0.548255462798
1 8:0.580888937186
1 9:0.647519422813
1 10:0.582757417216
1 11:0.876556280635
2 3:0.668496860947
2 4:0.541653415398
2 5:0.703736950121
2 6:0.81126389591
2 7:0.712133490865
2 8:0.754732383737
2 9:0.592881022027
2 10:0.856103852126
2 11:0.7362203111
3 4:0.293815230353
3 5:0.575915760613
3 6:0.644701552891
3 7:0.810172123279
3 8:0.662428597624
3 9:0.661935348037
3 10:0.935283204907
3 11:0.945242358263
4 5:0.682571320103
4 6:0.783533983357
4 7:0.802664856929
4 8:0.740764324055
4 9:0.664807138687
4 10:0.911886121362
4 11:0.856953918009
5 6:0.135355958335
5 7:0.474322252994
5 8:0.132348132334
5 9:0.247397810456
5 10:0.573421972267
5 11:0.609199908436
6 7:0.536032699494
6 8:0.187584546697
6 9:0.339317319072
6 10:0.607630625751
6 11:0.678986579471
7 8:0.418798462133
7 9:0.427015468559
7 10:0.299887960758
7 11:0.619501825808
8 9:0.227836337133
8 10:0.472734847642
8 11:0.541381105383
9 10:0.475234359971
9 11:0.383079518869
10 11:0.515838187823
</hsp>