sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1ASZ-R46-R20
X
>1F7V-B47-B20
X
>2BTE-E49-E20
X
>2QA4-02394-02417
X
>3IRW-R45-R75
X
>3MXH-R45-R75
X
</seq>
<hsp>
0 1:0.377697755343
0 2:0.409759635169
0 3:0.647625508766
0 4:0.853571833138
0 5:0.801902404256
1 2:0.132456458073
1 3:0.842379369893
1 4:0.974674711112
1 5:0.921096971964
2 3:0.84760870417
2 4:0.999999893405
2 5:0.929501253364
3 4:0.359339006903
3 5:0.426119648965
4 5:0.336485277477
</hsp>