sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-12065-12064
X
>3R8T-A1907-A1906
X
>2J01-A1831-A1830
X
>2J03-A1831-A1830
X
>3KNK-A1830-A1829
X
>3OH7-A1831-A1830
X
>3OHK-A1831-A1830
X
>3OHJ-A1831-A1830
X
>3OH5-A1831-A1830
X
>3OHZ-A1831-A1830
X
>3OI1-A1831-A1830
X
>3KNI-A1830-A1829
X
</seq>
<hsp>
0 1:0.42004891117
0 2:0.362786674636
0 3:0.360835066681
0 4:0.545983701479
0 5:0.545626982669
0 6:0.373663112343
0 7:0.385916421184
0 8:0.552622752417
0 9:0.52720112177
0 10:0.523404127144
0 11:0.863162276604
1 2:0.702143324234
1 3:0.683092860541
1 4:0.611088923068
1 5:0.758529862131
1 6:0.499668520134
1 7:0.5098960783
1 8:0.759671034469
1 9:0.646230772531
1 10:0.64105219581
1 11:0.819394678504
2 3:0.0462325357165
2 4:0.667576396014
2 5:0.538505614613
2 6:0.483805974498
2 7:0.498735548808
2 8:0.552552349903
2 9:0.598996761837
2 10:0.594871704362
2 11:1.0
3 4:0.659775406418
3 5:0.551621554954
3 6:0.485441271077
3 7:0.501240634729
3 8:0.564803475994
3 9:0.601811534738
3 10:0.596591688168
3 11:0.998683472372
4 5:0.435105355845
4 6:0.407736730211
4 7:0.402388232502
4 8:0.42171519102
4 9:0.417463339452
4 10:0.409301090085
4 11:0.555858121172
5 6:0.280628378378
5 7:0.269339490742
5 8:0.0260994813319
5 9:0.21293633428
5 10:0.213503610202
5 11:0.543866187052
6 7:0.0253402878779
6 8:0.287422295438
6 9:0.239031290149
6 10:0.2355056735
6 11:0.548251336544
7 8:0.275029722411
7 9:0.225598798068
7 10:0.222935174139
7 11:0.531397130663
8 9:0.204798260997
8 10:0.205716486697
8 11:0.530898214758
9 10:0.0251715320811
9 11:0.457302527275
10 11:0.454886557154
</hsp>