sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1DDY-G14-G10
X
>1DDY-E14-E10
X
>1DDY-C14-C10
X
>1ET4-E14-E10
X
>1ET4-B14-B10
X
>1ET4-A14-A10
X
>1ET4-D14-D10
X
>1ET4-C14-C10
X
>1DDY-A14-A10
X
</seq>
<hsp>
0 1:0.55568806218
0 2:0.40285210222
0 3:0.524827977745
0 4:0.408001318314
0 5:0.515224680346
0 6:0.459286657666
0 7:0.650000376408
0 8:0.87711629539
1 2:0.304782589458
1 3:0.672745589795
1 4:0.685042819665
1 5:0.411039551978
1 6:0.731082912053
1 7:0.743688320983
1 8:1.0
2 3:0.6938652346
2 4:0.561750922741
2 5:0.339331828542
2 6:0.618407282441
2 7:0.682409054923
2 8:0.924903136978
3 4:0.404364420436
3 5:0.558506872823
3 6:0.359078412305
3 7:0.458155204405
3 8:0.639208666665
4 5:0.429307623327
4 6:0.204990035419
4 7:0.366583791685
4 8:0.648788554147
5 6:0.497017663358
5 7:0.398093201895
5 8:0.676833256034
6 7:0.396291476593
6 8:0.603891903652
7 8:0.375923434449
</hsp>