sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3G6E-01771-01718
X
>2OTJ-01771-01718
X
>1VQ6-01771-01718
X
>1YJ9-01771-01718
X
>3CCV-01771-01718
X
>3CPW-01771-01718
X
>1VQ9-01771-01718
X
>1YIT-01771-01718
X
>3CME-01771-01718
X
>3CCM-01771-01718
X
>1YJN-01771-01718
X
>3G71-01771-01718
X
</seq>
<hsp>
0 1:0.235516687671
0 2:0.323550471324
0 3:0.697868476106
0 4:0.513941643028
0 5:0.301512041121
0 6:0.533617336861
0 7:0.768015646225
0 8:0.684268627807
0 9:0.438256921123
0 10:0.580118245834
0 11:0.694634731418
1 2:0.357432712416
1 3:0.699163362149
1 4:0.539765231571
1 5:0.35761065688
1 6:0.557702329319
1 7:0.736154998724
1 8:0.810098209142
1 9:0.350720554217
1 10:0.537874593081
1 11:0.751531928754
2 3:0.789352577107
2 4:0.606988060076
2 5:0.325265920342
2 6:0.394432696782
2 7:0.646436884424
2 8:0.833760728942
2 9:0.444953299915
2 10:0.489442452367
2 11:0.739753217391
3 4:0.776701179903
3 5:0.745920391241
3 6:0.940067046793
3 7:0.999995353167
3 8:0.939811303588
3 9:0.694311328418
3 10:0.569290131288
3 11:0.516414241612
4 5:0.644139197346
4 6:0.59281121359
4 7:0.772467366491
4 8:0.48929652676
4 9:0.556598095196
4 10:0.797094206766
4 11:0.625460393508
5 6:0.379630528796
5 7:0.551401147776
5 8:0.737211048932
5 9:0.300486477499
5 10:0.414656090859
5 11:0.628890559173
6 7:0.362750415366
6 8:0.724733464334
6 9:0.396010292425
6 10:0.562073380889
6 11:0.669879432085
7 8:0.854979896148
7 9:0.454971124336
7 10:0.5871724107
7 11:0.672934454727
8 9:0.74512837368
8 10:0.967413474417
8 11:0.629243461308
9 10:0.38472865172
9 11:0.568322195228
10 11:0.554062786128
</hsp>