sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1EUY-B57-B56
X
>1EXD-B57-B56
X
>3U5D-11552-11551
X
>3R8N-V60-V59
X
>1QF6-B60-B59
X
>1YLS-B34-B33
X
>2TRA-A59-A58
X
</seq>
<hsp>
0 1:0.437400779821
0 2:0.525365722562
0 3:1.0
0 4:0.47534087405
0 5:0.456926473607
0 6:0.575066638463
1 2:0.524670431277
1 3:0.701129202794
1 4:0.474259018308
1 5:0.366680430241
1 6:0.487680165551
2 3:0.778124425932
2 4:0.475921658794
2 5:0.424799620326
2 6:0.648567695225
3 4:0.852292771233
3 5:0.90358806647
3 6:0.834441032945
4 5:0.472156686919
4 6:0.286461270149
5 6:0.601317577714
</hsp>