sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3G78-A260-A259
X
>3R8N-A306-A305
X
>2UUA-A1090-A1089
X
>3KNI-A1979-A1978
X
>2VQF-A1090-A1089
X
>2UXC-A1090-A1089
X
>2VQE-A1090-A1089
X
>3R8O-A794-A793
X
>3R8S-A1887-A1886
X
>2J00-A1090-A1089
X
>1N32-A1090-A1089
X
>2J02-A1090-A1089
X
>1XMQ-A1085-A1084
X
>1FJG-A1090-A1089
X
</seq>
<hsp>
0 1:0.861973725223
0 2:0.767752695291
0 3:1.0
0 4:0.735341331533
0 5:0.751949453711
0 6:0.743845007809
0 7:0.815580346333
0 8:0.930612747672
0 9:0.730077060554
0 10:0.772676767785
0 11:0.730013214268
0 12:0.753248763154
0 13:0.756187502073
1 2:0.132493509801
1 3:0.184575136442
1 4:0.161891326658
1 5:0.145185003276
1 6:0.151559261388
1 7:0.0711718611607
1 8:0.131288301227
1 9:0.165215850384
1 10:0.134733607156
1 11:0.165830556619
1 12:0.146771591438
1 13:0.13380082082
2 3:0.267120515087
2 4:0.0612640638858
2 5:0.025645476536
2 6:0.037962470203
2 7:0.0738193029685
2 8:0.187222181937
2 9:0.0493969000815
2 10:0.0554737466272
2 11:0.0495300188971
2 12:0.0385676070702
2 13:0.044594201565
3 4:0.294829541816
3 5:0.281145126336
3 6:0.287590515781
3 7:0.219067955108
3 8:0.116484227019
3 9:0.303629194506
3 10:0.253550699573
3 11:0.304093371818
3 12:0.279622020808
3 13:0.276872142931
4 5:0.039517090929
4 6:0.0329941931393
4 7:0.104563018798
4 8:0.229552613617
4 9:0.0318562352289
4 10:0.0500236112231
4 11:0.0333708547613
4 12:0.0400805735693
4 13:0.0471116607643
5 6:0.0152694343145
5 7:0.0850289773926
5 8:0.204438558467
5 9:0.0274750284813
5 10:0.0449977526399
5 11:0.027803592555
5 12:0.020112142088
5 13:0.032444820065
6 7:0.0912191976096
6 8:0.211524140922
6 9:0.0191398489677
6 10:0.042950508374
6 11:0.019828284399
6 12:0.0162006264731
6 13:0.0295265266616
7 8:0.149172287302
7 9:0.103695794954
7 10:0.0793612864068
7 11:0.104046131949
7 12:0.0839110510363
7 13:0.0709314200996
8 9:0.227982742542
8 10:0.185283247093
8 11:0.228014118983
8 12:0.203449686521
8 13:0.202253915476
9 10:0.0579613149399
9 11:0.00207564766386
9 12:0.0294882431971
9 13:0.0378859797262
10 11:0.0585509112551
10 12:0.0370283816105
10 13:0.0453598047698
11 12:0.0294510601785
11 13:0.0380355439478
12 13:0.0239643311903
</hsp>