sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-929-928
X
>3BNP-A8-A7
X
>1XMQ-A790-A789
X
>3OHK-A1980-A1979
X
>1QVG-02051-02050
X
>3OHJ-A1980-A1979
X
>3KNH-A1264-A1263
X
>3CC7-02051-02050
X
>3G71-02051-02050
X
>1S72-02051-02050
X
>1NJI-A2051-A2050
X
>1JJ2-02051-02050
X
>1FFK-02004-02003
X
</seq>
<hsp>
0 1:0.484108275381
0 2:0.999997185914
0 3:0.724422095719
0 4:0.784439836475
0 5:0.713043738222
0 6:0.931967134171
0 7:0.878325791103
0 8:0.841487062477
0 9:0.794932003245
0 10:0.800014204489
0 11:0.790547059844
0 12:0.795955622196
1 2:0.725698267826
1 3:0.411718690952
1 4:0.474582936917
1 5:0.403735813054
1 6:0.741017751302
1 7:0.565491518682
1 8:0.536650159848
1 9:0.504608651059
1 10:0.491360343489
1 11:0.498498521285
1 12:0.503847753929
2 3:0.417049977749
2 4:0.289161351491
2 5:0.406309158642
2 6:0.278826852694
2 7:0.212741869198
2 8:0.236595912084
2 9:0.263603269346
2 10:0.271798187994
2 11:0.266013126812
2 12:0.272772651314
3 4:0.14283569319
3 5:0.0339412332307
3 6:0.527367280443
3 7:0.244113166155
3 8:0.224881440654
3 9:0.180301592391
3 10:0.179487044547
3 11:0.182431066917
3 12:0.169068498059
4 5:0.128230648329
4 6:0.409270045945
4 7:0.120060865953
4 8:0.0985269089447
4 9:0.0627278284227
4 10:0.0561039402636
4 11:0.0622624573834
4 12:0.0561442505924
5 6:0.51098749359
5 7:0.231938138497
5 8:0.210382231817
5 9:0.163493591079
5 10:0.162892369208
5 11:0.1647050699
5 12:0.153355827181
6 7:0.369488149956
6 8:0.37032175642
6 9:0.386164874818
6 10:0.400450527742
6 11:0.382887057648
6 12:0.398910128022
7 8:0.0602027050629
7 9:0.101904582859
7 10:0.0963628906255
7 11:0.102243382913
7 12:0.105063732931
8 9:0.071363939603
8 10:0.0695995928288
8 11:0.0694599997651
8 12:0.0720287667634
9 10:0.0424962034132
9 11:0.0112710115867
9 12:0.021483116029
10 11:0.0396416861341
10 12:0.0426670470653
11 12:0.0276252036572
</hsp>