sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A2497-A2496
X
>2J03-A2352-A2351
X
>2J01-A2352-A2351
X
>3KNK-A2052-A2051
X
>2ZJR-Y31-Y30
X
>3R8T-B36-B35
X
>2J01-A2544-A2543
X
>2J03-A2544-A2543
X
>3R8O-A306-A305
X
>3OHY-A444-A443
X
>3OI0-A444-A443
X
>1ASZ-S73-S72
X
</seq>
<hsp>
0 1:0.445982974561
0 2:0.449839903419
0 3:0.885399741818
0 4:0.423966625783
0 5:0.576976557441
0 6:0.270825002184
0 7:0.275231894406
0 8:0.890479960542
0 9:0.34179346298
0 10:0.350637518138
0 11:0.280380263768
1 2:0.0113874090326
1 3:0.79752883666
1 4:0.534730365394
1 5:0.261091699826
1 6:0.501209255276
1 7:0.51242051009
1 8:0.805364785147
1 9:0.49962875365
1 10:0.515464943315
1 11:0.421970146391
2 3:0.796119198741
2 4:0.537259819417
2 5:0.255020394561
2 6:0.504938348478
2 7:0.516159593645
2 8:0.800108656089
2 9:0.504473104159
2 10:0.520173701704
2 11:0.420451765303
3 4:0.525195301544
3 5:0.828517880039
3 6:0.990818928893
3 7:0.995539419744
3 8:0.965082526283
3 9:0.994019310448
3 10:0.999993073507
3 11:0.783210253538
4 5:0.648596774986
4 6:0.548577569793
4 7:0.551560099739
4 8:0.914107221911
4 9:0.569374765562
4 10:0.575842364441
4 11:0.432931496535
5 6:0.688624245083
5 7:0.699583762124
5 8:0.886952836261
5 9:0.718655679722
5 10:0.733783219937
5 11:0.500491558532
6 7:0.0127673284246
6 8:0.849173624673
6 9:0.187966534816
6 10:0.188822675697
6 11:0.376007241316
7 8:0.853543872587
7 9:0.18817217312
7 10:0.187979578746
7 11:0.382702889307
8 9:0.835077908715
8 10:0.833366860107
8 11:0.698699364991
9 10:0.0205473259613
9 11:0.473524346774
10 11:0.47983716341
</hsp>