sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNH-A781-A780
X
>1YJ9-929-928
X
>3CPW-929-928
X
>3KNK-A2728-A2727
X
>3OXB-B67-B66
X
>1VQK-929-928
X
>3CCM-929-928
X
>3CME-0283-0282
X
>1VQM-929-928
X
>3CCE-929-928
X
>1EFW-D72-D71
X
</seq>
<hsp>
0 1:0.882588651902
0 2:0.941836412055
0 3:0.676112453747
0 4:0.437820372272
0 5:0.9912680878
0 6:0.983714194086
0 7:0.757882991563
0 8:0.997986980631
0 9:0.999998543565
0 10:0.630454875189
1 2:0.111207243443
1 3:0.445978304765
1 4:0.574416901744
1 5:0.164408237197
1 6:0.200216557626
1 7:0.306572393109
1 8:0.182473448456
1 9:0.246367003916
1 10:0.502026314902
2 3:0.440155241745
2 4:0.627257339975
2 5:0.111751193923
2 6:0.107030921006
2 7:0.31388706988
2 8:0.101805138157
2 9:0.154833520926
2 10:0.511080624986
3 4:0.441812094728
3 5:0.506396262646
3 6:0.453103051602
3 7:0.30069029042
3 8:0.503369485319
3 9:0.448723978126
3 10:0.374237643909
4 5:0.677048692368
4 6:0.660330939446
4 7:0.469853813861
4 8:0.681253028827
4 9:0.700698000786
4 10:0.374484982686
5 6:0.106371588645
5 7:0.324417686519
5 8:0.0648527259388
5 9:0.137501332508
5 10:0.527457210277
6 7:0.320901672109
6 8:0.0922224913035
6 9:0.100099476785
6 10:0.5097587642
7 8:0.338023853119
7 9:0.306615488581
7 10:0.262481939772
8 9:0.127871617128
8 10:0.524454766254
9 10:0.50974699599
</hsp>