sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A1072-A1081
X
>1VQ5-0129-0119
X
>1QVG-0129-0119
X
>1YHQ-0129-0119
X
>1YI2-0129-0119
X
>1KD1-A129-A119
X
>1VQ7-0129-0119
X
>1M90-A129-A119
X
>1Q82-A129-A119
X
>3CC2-0129-0119
X
>1NJI-A129-A119
X
>1K8A-A129-A119
X
>3CCE-0129-0119
X
>1VQ4-0129-0119
X
>3CC7-0129-0119
X
</seq>
<hsp>
0 1:0.996398833373
0 2:0.977224244146
0 3:1.0
0 4:0.996922646504
0 5:0.993031805578
0 6:0.994894038219
0 7:0.986946406696
0 8:0.983429580322
0 9:0.995676106385
0 10:0.980925487097
0 11:0.983742547468
0 12:0.97963288281
0 13:0.995685686588
0 14:0.988590462606
1 2:0.0264952311589
1 3:0.0190224850764
1 4:0.0144467424211
1 5:0.0222630005416
1 6:0.0150374429841
1 7:0.0200261455595
1 8:0.0249926345494
1 9:0.0171545227588
1 10:0.0234428642292
1 11:0.0281086050276
1 12:0.0220287508293
1 13:0.019477853429
1 14:0.0213259835093
2 3:0.0383127460827
2 4:0.0308685917447
2 5:0.0323228757794
2 6:0.0310399799172
2 7:0.0261040863919
2 8:0.0283740226553
2 9:0.0322106366733
2 10:0.0246483006318
2 11:0.0291836100015
2 12:0.0131646214623
2 13:0.028683367317
2 14:0.0218713744837
3 4:0.0212756667213
3 5:0.0161008189177
3 6:0.00842176488601
3 7:0.0189863816681
3 8:0.0221210799606
3 9:0.00902297423029
3 10:0.0240434005817
3 11:0.0230349135689
3 12:0.0322749603845
3 13:0.0184658417983
3 14:0.0234003616015
4 5:0.0164672828152
4 6:0.0176994471711
4 7:0.0209370009647
4 8:0.0248699457983
4 9:0.0165643707184
4 10:0.0236287476113
4 11:0.0256229921436
4 12:0.0219536240128
4 13:0.0160391280361
4 14:0.0189772181837
5 6:0.0129472396141
5 7:0.0159731196948
5 8:0.017864103945
5 9:0.00836601655437
5 10:0.0191084846893
5 11:0.0138322096523
5 12:0.024075029814
5 13:0.0116798934805
5 14:0.0128777136191
6 7:0.0116908357627
6 8:0.0157071867505
6 9:0.00633945610238
6 10:0.0169987350832
6 11:0.0175791376467
6 12:0.0245984052625
6 13:0.0136304231765
6 14:0.0174730598349
7 8:0.00603735399432
7 9:0.0145378620547
7 10:0.00780412673105
7 11:0.0122068816742
7 12:0.0193603510441
7 13:0.0146716440481
7 14:0.01565944987
8 9:0.0178053695712
8 10:0.00658234438103
8 11:0.0108493937716
8 12:0.0211309509728
8 13:0.0189709679115
8 14:0.0185379250605
9 10:0.019408949223
9 11:0.0167159369696
9 12:0.0252667942718
9 13:0.0122953898473
9 14:0.0153110460992
10 11:0.013026507724
10 12:0.0170752709855
10 13:0.0197014473224
10 14:0.0183550670032
11 12:0.022185110036
11 13:0.0160199641263
11 14:0.013956660846
12 13:0.0226718294713
12 14:0.0169059699274
13 14:0.0105313696143
</hsp>