sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8N-A50-A49
X
>3CXC-01319-01317
X
>1VQP-01319-01317
X
>3CCM-01319-01317
X
>1VQL-01319-01317
X
>1YHQ-01319-01317
X
>1VQ4-01319-01317
X
>1VQ9-01319-01317
X
>3CME-01319-01317
X
>1KD1-A1319-A1317
X
>2OTJ-01319-01317
X
>2QEX-01319-01317
X
>2OTL-01319-01317
X
>3CCJ-01319-01317
X
</seq>
<hsp>
0 1:0.992525614219
0 2:0.99499222944
0 3:0.996231233483
0 4:0.993897472789
0 5:0.995101602202
0 6:0.993293881253
0 7:0.997921314003
0 8:1.0
0 9:0.992608712661
0 10:0.986478648673
0 11:0.983665099062
0 12:0.996494954192
0 13:0.971386123288
1 2:0.0239065246396
1 3:0.0183382610932
1 4:0.0204228378743
1 5:0.0201037631089
1 6:0.0149938459883
1 7:0.0190751666796
1 8:0.0239829740982
1 9:0.0140534699047
1 10:0.0201035760864
1 11:0.0298593296078
1 12:0.0177725292546
1 13:0.0350403642812
2 3:0.0139377207408
2 4:0.00910376084847
2 5:0.00623582960078
2 6:0.0158775927146
2 7:0.0104737073707
2 8:0.0192185133208
2 9:0.0165731488772
2 10:0.0179613418205
2 11:0.017310522028
2 12:0.0102225611195
2 13:0.0397904962114
3 4:0.00726113893777
3 5:0.0147770001613
3 6:0.0120239796822
3 7:0.0167984470388
3 8:0.0128505468683
3 9:0.0141884328637
3 10:0.0228713068381
3 11:0.0263449880905
3 12:0.0123550413031
3 13:0.0410939613756
4 5:0.0115358898294
4 6:0.0135316139256
4 7:0.0145249825175
4 8:0.0151543427575
4 9:0.0152635903538
4 10:0.0191999161461
4 11:0.0223021269194
4 12:0.0127050230593
4 13:0.0404754630118
5 6:0.0127994578503
5 7:0.00677427763474
5 8:0.0201824866098
5 9:0.0145423811376
5 10:0.0151901006645
5 11:0.0174319885009
5 12:0.00705813426823
5 13:0.0367469293351
6 7:0.01519204953
6 8:0.0218949139298
6 9:0.0133924797637
6 10:0.0208458700119
6 11:0.0234920040807
6 12:0.010608242892
6 13:0.0361991434887
7 8:0.0210526605219
7 9:0.0162135524057
7 10:0.0155976688448
7 11:0.0201634109438
7 12:0.00935909303003
7 13:0.0395847473567
8 9:0.0219994698418
8 10:0.0247892040499
8 11:0.0328117142653
8 12:0.0186493821243
8 13:0.042834641191
9 10:0.0193075458205
9 11:0.0211133849952
9 12:0.0118105838305
9 13:0.0363322856487
10 11:0.0189084128658
10 12:0.0187836815719
10 13:0.0312235715499
11 12:0.020195701014
11 13:0.0361595886182
12 13:0.0362332894246
</hsp>