sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A135-A134
X
>3OHZ-A135-A134
X
>3OHJ-A135-A134
X
>3OHK-A1755-A1754
X
>3OHZ-A1755-A1754
X
>2J03-A428-A427
X
>3F1F-A435-A434
X
>3F1F-A1833-A1832
X
>1YIJ-02187-02186
X
>3CCU-02187-02186
X
>1VQ5-02187-02186
X
>1YJ9-02187-02186
X
</seq>
<hsp>
0 1:0.0507515151413
0 2:0.0768681349177
0 3:0.809595896935
0 4:0.831769009678
0 5:0.798430334418
0 6:0.801824978415
0 7:0.855173706268
0 8:0.76775297915
0 9:0.820909517376
0 10:0.798876732023
0 11:0.787400336214
1 2:0.0654672515579
1 3:0.798331169122
1 4:0.819279560469
1 5:0.79362428677
1 6:0.794469999692
1 7:0.841842595581
1 8:0.753521440706
1 9:0.805798527959
1 10:0.781996662794
1 11:0.77791752994
2 3:0.818156854657
2 4:0.839567232085
2 5:0.823058207785
2 6:0.82214590687
2 7:0.865076842599
2 8:0.735542009862
2 9:0.782803476013
2 10:0.763738949683
2 11:0.753683028139
3 4:0.0610005827587
3 5:0.251869552333
3 6:0.202810635836
3 7:0.0957887422741
3 8:0.672369299649
3 9:0.766960757283
3 10:0.726786165119
3 11:0.834743515923
4 5:0.265672998592
4 6:0.21056734697
4 7:0.0670008780972
4 8:0.693603124165
4 9:0.787146381315
4 10:0.749614249908
4 11:0.854822388551
5 6:0.063880032901
5 7:0.239985132494
5 8:0.832427503652
5 9:0.930427360761
5 10:0.887695389918
5 11:0.999999946202
6 7:0.184670044672
6 8:0.804100208657
6 9:0.900627827907
6 10:0.859659453832
6 11:0.973735830694
7 8:0.73755652727
7 9:0.831000362247
7 10:0.789740030639
7 11:0.901757490912
8 9:0.109167163868
8 10:0.0992792071241
8 11:0.237275095832
9 10:0.103480572394
9 11:0.213244289401
10 11:0.250156512875
</hsp>