sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A390-A389
X
>1K8A-A2645-A2644
X
>2J03-A1922-A1921
X
>1M90-A2645-A2644
X
>3CCS-02645-02644
X
>1K9M-A2645-A2644
X
>1N8R-A2645-A2644
X
>3CC7-02645-02644
X
>3CCV-02645-02644
X
>3CC4-02645-02644
X
>3CCL-02645-02644
X
</seq>
<hsp>
0 1:0.853776212968
0 2:0.743592785768
0 3:0.838923646731
0 4:0.983796286426
0 5:0.845529353831
0 6:0.881648328957
0 7:1.0
0 8:0.937476798098
0 9:0.987360127949
0 10:0.956559746351
1 2:0.253715711974
1 3:0.0526972929599
1 4:0.157391327441
1 5:0.0329275120759
1 6:0.0802017085612
1 7:0.210511265845
1 8:0.142215411668
1 9:0.171321642332
1 10:0.148591923488
2 3:0.218519524398
2 4:0.350375896476
2 5:0.235786442057
2 6:0.254873734001
2 7:0.315145617778
2 8:0.262700157054
2 9:0.313626052376
2 10:0.295906313183
3 4:0.173279142543
3 5:0.0312657772521
3 6:0.070720372668
3 7:0.196258975777
3 8:0.127766075957
3 9:0.164067437307
3 10:0.140515974013
4 5:0.167014049918
4 6:0.120825195211
4 7:0.129677181532
4 8:0.121890646601
4 9:0.100121460553
4 10:0.0952653889101
5 6:0.0740082639327
5 7:0.204207028067
5 8:0.128980805938
5 9:0.167772051312
5 10:0.140072758015
6 7:0.148775344514
6 8:0.092000935441
6 9:0.116242667791
6 10:0.0919197111592
7 8:0.0965655276042
7 9:0.0600471640867
7 10:0.0828841210277
8 9:0.0797970426436
8 10:0.0397522520444
9 10:0.0608483448208
</hsp>