sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1A9N-Q15-Q14
X
>3NDB-M73-M72
X
>3KNI-A1550-A1549
X
>3OH7-A1551-A1550
X
>3OHZ-A1551-A1550
X
>2UUA-A514-A513
X
>3OI1-A1551-A1550
X
>2UXC-A514-A513
X
>3OGY-A514-A513
X
</seq>
<hsp>
0 1:0.0754341957859
0 2:0.96232821447
0 3:0.998881768262
0 4:0.981118313633
0 5:0.92716157321
0 6:0.983187307488
0 7:0.92577840787
0 8:0.982850372685
1 2:0.965265268831
1 3:0.999999645325
1 4:0.982877704936
1 5:0.925254870217
1 6:0.984963150584
1 7:0.923790708831
1 8:0.982925852116
2 3:0.0543821434061
2 4:0.0343088398659
2 5:0.100244875321
2 6:0.0382685199801
2 7:0.104871419752
2 8:0.0779073247772
3 4:0.023985647916
3 5:0.102450193593
3 6:0.0233442913641
3 7:0.108551373825
3 8:0.0605403364145
4 5:0.0954013602819
4 6:0.00901748861769
4 7:0.101644163698
4 8:0.0637088387412
5 6:0.0971496722103
5 7:0.0147013896928
5 8:0.0686388609807
6 7:0.102903709554
6 8:0.0636625236138
7 8:0.0688830639102
</hsp>