sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1N8R-A1142-A1151
X
>1Q82-A1142-A1151
X
>1JJ2-01142-01151
X
>1KD1-A1142-A1151
X
>3CCJ-01142-01151
X
>1M90-A1142-A1151
X
>1Q86-A1142-A1151
X
</seq>
<hsp>
0 1:0.0471051451622
0 2:0.134619009776
0 3:0.053070222114
0 4:0.951680022518
0 5:0.0672637272567
0 6:0.216161099676
1 2:0.120786495223
1 3:0.0415292774844
1 4:0.939616467421
1 5:0.062968826259
1 6:0.21568911957
2 3:0.116903100102
2 4:1.0
2 5:0.154068379565
2 6:0.304449342827
3 4:0.958225797252
3 5:0.052678651058
3 6:0.222318864834
4 5:0.925798240345
4 6:0.771971913237
5 6:0.182565730388
</hsp>