sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QEX-0129-0119
X
>3F1E-A1202-A1201
X
>2VQE-A1202-A1201
X
>3F1F-A182-A181
X
>3KNK-A179-A178
X
>3OHD-A1202-A1201
X
>3OHC-A1202-A1201
X
</seq>
<hsp>
0 1:0.810827052601
0 2:0.81256438839
0 3:0.989868936354
0 4:1.0
0 5:0.913831536
0 6:0.915804134605
1 2:0.0430690334969
1 3:0.258049192107
1 4:0.304236407631
1 5:0.149266158969
1 6:0.150771345755
2 3:0.243367896616
2 4:0.290171607988
2 5:0.149120887389
2 6:0.150647114283
3 4:0.0658725735257
3 5:0.137467967794
3 6:0.136105872566
4 5:0.177824492423
4 6:0.176401883454
5 6:0.00272397927354
</hsp>