sequences=22
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2388-A2387
X
>3U5D-139-138
X
>3OHC-A1298-A1198
X
>3OHD-A1298-A1198
X
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X
>3OHZ-A2313-A2312
X
>3OI1-A2313-A2312
X
>2ZZM-B10-B9
X
>3R8T-A1151-A1150
X
>1Q86-A687-A731
X
>2J00-V15-V14
X
>1QVG-0687-0731
X
>3CXC-0687-0731
X
>1VQ4-0687-0731
X
>1Q81-A687-A731
X
>1YJ9-0687-0731
X
>2QA4-0686-0730
X
>1KD1-A687-A731
X
>1K9M-A687-A731
X
>1Q82-A687-A731
X
>1N8R-A687-A731
X
>1K8A-A687-A731
X
</seq>
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