sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X1071-X1070
X
>2QUS-A22-A21
X
>3KNK-A1576-A1575
X
>2HVY-E16-E15
X
>3R8S-A1567-A1566
X
>3R8T-A1567-A1566
X
>2J01-A1515-A1514
X
>2J03-A1515-A1514
X
>1TTT-E24-E23
X
</seq>
<hsp>
0 1:0.637197380967
0 2:0.245497814336
0 3:0.294784061251
0 4:0.859006300344
0 5:0.728445544963
0 6:0.904404813529
0 7:0.903769949614
0 8:0.506069300626
1 2:0.590017869597
1 3:0.748941083035
1 4:0.964845206727
1 5:0.901257650662
1 6:0.956239508224
1 7:0.957376906097
1 8:1.0
2 3:0.370727618079
2 4:0.809030616681
2 5:0.700530665878
2 6:0.825131728217
2 7:0.825839439942
2 8:0.548925159264
3 4:0.647012042008
3 5:0.494739075231
3 6:0.699029398727
3 7:0.696910134746
3 8:0.319987361672
4 5:0.204976324798
4 6:0.154387402021
4 7:0.152574649171
4 8:0.73977273814
5 6:0.2662364905
5 7:0.26194601119
5 8:0.613876521522
6 7:0.0099103438313
6 8:0.798907751004
7 8:0.796760454497
</hsp>