sequences=23
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-2243-2244
X
>3R8T-A2719-A2720
X
>2QWY-B8-B9
X
>1YIJ-953-954
X
>3U5B-2111-2112
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>3CCR-0737-0738
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>3KNH-A665-A666
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>1QVG-0903-0904
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>1NJI-A903-A904
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>3CCS-0737-0738
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>3CME-0903-0904
X
>1N8R-A903-A904
X
>1M90-A1073-A1074
X
>3CCQ-01304-01305
X
>1QVG-0737-0738
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>3F1G-V1-V2
X
>1FFK-01072-01073
X
>1K8A-A1422-A1423
X
>1NJI-A1422-A1423
X
>1VQM-01595-01596
X
>1VQ5-01422-01423
X
>1VQO-01422-01423
X
>2UXC-A674-A675
X
</seq>
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