sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2HOL-A54-A55
X
>3RG5-A6-A7
X
>3U5H-52656-52657
X
>1VQ7-0192-0193
X
>3CCM-0192-0193
X
>3U5F-6793-6794
X
>3U5D-1566-1567
X
>1VQP-0192-0193
X
>3CCR-01-02
X
>1K9M-A192-A193
X
>3CC2-01844-01845
X
>2OEU-B16-B17
X
>3CCL-01-02
X
>2VQF-A1282-A1283
X
>3R8O-A53-A54
X
>3F1E-A1282-A1283
X
>3OHC-A1282-A1283
X
</seq>
<hsp>
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0 2:0.241468157584
0 3:0.348360509795
0 4:0.361479040844
0 5:0.259867794942
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15 16:0.196742644434
</hsp>