sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1E-A168-A169
X
>3OI1-A584-A585
X
>3U5H-52480-52482
X
>2J02-A1326-A1327
X
>3OI0-A11-A12
X
>3OUY-C8-C9
X
>3U5D-12886-12887
X
>3HHN-C15-C16
X
>3G6E-01556-01557
X
>3U5H-8137-8138
X
>1Q81-A1556-A1557
X
</seq>
<hsp>
0 1:0.829827823641
0 2:0.640004655746
0 3:0.620902534969
0 4:0.698067967484
0 5:0.910630378788
0 6:0.6734039009
0 7:0.807017387906
0 8:0.825267982295
0 9:0.673218943193
0 10:0.728217365022
1 2:0.993937670932
1 3:1.0
1 4:0.53896041981
1 5:0.959006781138
1 6:0.818462402066
1 7:0.775848047661
1 8:0.946801790261
1 9:0.951415005053
1 10:0.912898255756
2 3:0.60667483653
2 4:0.821188026583
2 5:0.795820959171
2 6:0.43230473288
2 7:0.709753762046
2 8:0.681467878815
2 9:0.504944218212
2 10:0.586403891109
3 4:0.690013649322
3 5:0.626513698614
3 6:0.633952355876
3 7:0.5191348736
3 8:0.608224746316
3 9:0.3853467063
3 10:0.618173170564
4 5:0.595713721691
4 6:0.524898044899
4 7:0.417903630414
4 8:0.631331100003
4 9:0.614236858084
4 10:0.51623693848
5 6:0.506355820612
5 7:0.250933779226
5 8:0.197544926099
5 9:0.373199949703
5 10:0.360232713371
6 7:0.436665347127
6 8:0.438117831972
6 9:0.388814050133
6 10:0.24266263133
7 8:0.325991528808
7 9:0.360043492642
7 10:0.376838188005
8 9:0.278191310221
8 10:0.307198478711
9 10:0.322088664657
</hsp>