sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A618-A619
X
>3CMA-02151-02152
X
>2QA4-0396-0397
X
>3G71-0396-0397
X
>1FFK-0395-0396
X
>3CCU-0396-0397
X
>1Q81-A396-A397
X
</seq>
<hsp>
0 1:0.491080497382
0 2:1.0
0 3:0.699660548123
0 4:0.705157243318
0 5:0.651074426603
0 6:0.702007567523
1 2:0.72162774127
1 3:0.697965715561
1 4:0.620046815564
1 5:0.640056349644
1 6:0.568325615933
2 3:0.95724094999
2 4:0.919696175771
2 5:0.913426242142
2 6:0.89762846557
3 4:0.252540286582
3 5:0.139883367471
3 6:0.305876802028
4 5:0.25524646295
4 6:0.212640666789
5 6:0.234675264743
</hsp>