sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J01-A1022-A1024
X
>1VQ9-01077-01079
X
>1YJ9-01077-01079
X
>1FFK-01076-01078
X
>1K8A-A1077-A1079
X
>1VQN-01077-01079
X
>1YJN-01077-01079
X
</seq>
<hsp>
0 1:0.870009288019
0 2:0.999990077133
0 3:0.613978164973
0 4:0.916596562843
0 5:0.752160745458
0 6:0.746633297583
1 2:0.496856130323
1 3:0.507440687293
1 4:0.260393636092
1 5:0.173537623872
1 6:0.422353693598
2 3:0.700429145503
2 4:0.354946796496
2 5:0.504722887617
2 6:0.42320748104
3 4:0.465530935123
3 5:0.340129845958
3 6:0.497785821906
4 5:0.23463084456
4 6:0.344815029859
5 6:0.359391398924
</hsp>