sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1EXD-B30-B34
X
>1GTR-B30-B34
X
>3R8S-A1845-A1883
X
>1ZJW-B30-B34
X
>3G78-A22-A119
X
>1O0C-B30-B34
X
>1QTQ-B30-B34
X
>2RD2-B30-B34
X
>1EUY-B30-B34
X
</seq>
<hsp>
0 1:0.777406517142
0 2:0.999999210157
0 3:0.614429969529
0 4:0.968006472867
0 5:0.824918887452
0 6:0.405968834246
0 7:0.570162462431
0 8:0.482275145642
1 2:0.498827287441
1 3:0.37957655056
1 4:0.507995331449
1 5:0.493324646482
1 6:0.548181585456
1 7:0.433260777111
1 8:0.407098871558
2 3:0.524501778348
2 4:0.335369171347
2 5:0.562046515306
2 6:0.689977934311
2 7:0.621803731851
2 8:0.576873253701
3 4:0.415622773757
3 5:0.282244037407
3 6:0.29900481832
3 7:0.152731719728
3 8:0.197663304353
4 5:0.319885518288
4 6:0.649446937859
4 7:0.462804250251
4 8:0.541208834281
5 6:0.495757536522
5 7:0.266386733337
5 8:0.43609678378
6 7:0.305254465069
6 8:0.185923308205
7 8:0.249398523091
</hsp>